DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Cd63

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_063119178.1 Gene:Cd63 / 29186 RGDID:62080 Length:304 Species:Rattus norvegicus


Alignment Length:197 Identity:49/197 - (24%)
Similarity:83/197 - (42%) Gaps:58/197 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 CATGTIKYSLFLFNALWAILGILVLIF-----------GGLGWGAMPDAYAIGILILGGTILVIS 56
            ||.|.|            .:|:.|.:.           |.|    :|    :.|:.:|..:.:::
  Rat    48 CAVGLI------------AIGVAVQVVLKQAITHETTAGSL----LP----VVIIAVGAFLFLVA 92

  Fly    57 LFGCCGAVRESPRMLWTYASLLLILLLLIVAFIIL------NPKDVFKKYALQTVENQWELEQTK 115
            ..|||||.:|:..::.|:|..|.:::|:.||..|.      ..|..|.|...:.::|.  |...|
  Rat    93 FVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQVKSEFSKSFQKQMQNY--LTDNK 155

  Fly   116 PGS-MDIIQKTYYCCGRDSAQDYLDIKFW-------NNTVPSSCCKDDS--CVNPL---NLYVRG 167
            ..: :|.:||...|||   |.:|.|   |       .:.||.|||.:.:  |.|..   .::.:|
  Rat   156 TATILDKLQKENKCCG---ASNYTD---WERIPGMAKDRVPDSCCINITVGCGNDFKESTIHTQG 214

  Fly   168 CL 169
            |:
  Rat   215 CV 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 31/139 (22%)
tetraspanin_LEL 94..178 CDD:239401 25/89 (28%)
Cd63XP_063119178.1 None

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