DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Tspan10

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_663338.2 Gene:Tspan10 / 208634 MGIID:2384781 Length:332 Species:Mus musculus


Alignment Length:254 Identity:67/254 - (26%)
Similarity:113/254 - (44%) Gaps:51/254 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ATGT--IKYSLFLFNALWAILGILVLIFG----------GLGWGAMPDAYAIGILILGGTIL-VI 55
            :||:  :||.:||.|.|:::..:|.|..|          |:|||.......:.:|:|||.:: |:
Mouse    69 STGSNCVKYLIFLSNFLFSLPSLLALAAGLWGLTVKRSQGIGWGGPVPTDPMLMLVLGGLVVSVV 133

  Fly    56 SLFGCCGAVRESPRML-WTYASLLLILLLLIVAFIIL----NPKDVFKKYALQ-TVENQWELEQT 114
            ||.||.||..|:..:| |...::|..|.|..:|.:::    .|.....||.|. .:.:.|: :..
Mouse   134 SLSGCLGAFCENSCLLHWYCGAVLFCLALEALAGVLMVTLWKPLQDSLKYTLHAAIIHYWD-DPD 197

  Fly   115 KPGSMDIIQKTYYCCGRDSAQDYLDIKFWN--------NTVPSSCC----KDDSCVN------PL 161
            ....:|.:|....|||..|.||:....::|        .::|:|||    :|.:.||      .|
Mouse   198 LHFLLDQVQLGLQCCGAVSYQDWQQNLYFNCSSPGVQACSLPASCCINPQEDGAVVNTQCGFGAL 262

  Fly   162 NL---------YVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVILLLAI----ILAIH 207
            .|         :::||...::|........:|.....::......||||.    .||:|
Mouse   263 GLDQNVAGQVVFLQGCWPALQEWLRGNTGAIGDCAVAVVMIQGTELLLAACLLRALAVH 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 39/138 (28%)
tetraspanin_LEL 94..178 CDD:239401 25/111 (23%)
Tspan10NP_663338.2 Tetraspanin 75..225 CDD:459767 44/150 (29%)
oculospanin_like_LEL 171..290 CDD:239420 26/119 (22%)

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