DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and tsp-9

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_508232.1 Gene:tsp-9 / 180472 WormBaseID:WBGene00006635 Length:233 Species:Caenorhabditis elegans


Alignment Length:248 Identity:56/248 - (22%)
Similarity:94/248 - (37%) Gaps:58/248 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGCATGTIKYSLFLFNALWAILGILVLIFGGLGWGAMPDAY------------------------ 41
            |.|....||...|:.|....|.|  .||.|...|..:...:                        
 Worm     1 MVCGNSCIKLLFFVINFFICIFG--ALICGFSLWANLDKNFGSHLSDFVRQIEGIDQKLVNEIAE 63

  Fly    42 ---AIGILI-LGGTILVISLFGCCGAVRESPRMLWTYASLLLILL---LLIVAFIILNPKDVFK- 98
               ::.||: :|..:.::..||||||..|||.:|..:..:::||.   |....|.:.|.::... 
 Worm    64 YQASLWILVAVGALLFLVGFFGCCGAGCESPVLLGLFIFIIVILTAVELGATVFAMTNREEFVSS 128

  Fly    99 -KYALQTVENQWELEQT-KPGSMDIIQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPL 161
             :..|:.....:||.:. ||     ||..:.|||. :||..      |..:....|..:....|:
 Worm   129 IQQVLKKSSATYELRKNIKP-----IQNVFQCCGA-TAQTQ------NRYIQDGLCGPEPLSAPV 181

  Fly   162 NLYVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVILLLAIILA-----IHYT 209
            |.:.|  :..:.:::.:....:.:|   ||......:|.:.||.     |.||
 Worm   182 NCFDR--ISHMVQSWGESIVVVAFL---LLAIELFAILFSCILCRSSQEIRYT 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 36/155 (23%)
tetraspanin_LEL 94..178 CDD:239401 17/86 (20%)
tsp-9NP_508232.1 Tetraspanin 8..221 CDD:459767 51/231 (22%)

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