DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and tsp-12

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_501853.1 Gene:tsp-12 / 177890 WormBaseID:WBGene00006638 Length:308 Species:Caenorhabditis elegans


Alignment Length:266 Identity:60/266 - (22%)
Similarity:102/266 - (38%) Gaps:92/266 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFGGLGWGAMPDAYAIG---------------ILILGGTILVISL 57
            :|||:|.||.::.:||..:|:||  .|..:.....:.               :||:|....:|..
 Worm    38 VKYSVFSFNVIFFLLGFGLLLFG--VWAQIEKNTFVNMLSKASKLYLDPTWPLLIVGFLTFIIGF 100

  Fly    58 FGCCGAVRESPRMLWTYASLLLILLLL-----IVAFIILNPKDVFKKYALQTVENQWELEQTKPG 117
            .||.|::||:...|..|::||.:||:.     :.|:...:..|.:.:..|..|...:..:.....
 Worm   101 SGCVGSLRENTSFLTFYSTLLGLLLIAEFSAGVFAYACRDQLDNYIRNLLNDVVVGYRDDPDLQL 165

  Fly   118 SMDIIQKTYYCCGRDSAQDYLDIKFWN-NT----------------VPSSCCKDDS--------C 157
            .:|.:|:|:.|||.:.|.|      |: ||                ||.|||.:.|        |
 Worm   166 LIDSMQETWMCCGINGADD------WDRNTYFSIEAREVASPEAGGVPFSCCINSSKLEFKNYFC 224

  Fly   158 ----------------------VNPLNLYVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVILLL 200
                                  .:..::|..|||.|::                 |..|..:||:
 Worm   225 GHGVRLKPESHMAAHLAAQRVMAHTASIYTEGCLPKLQ-----------------LWLNNNMLLV 272

  Fly   201 AIILAI 206
            |:.:.|
 Worm   273 AVSMVI 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 35/141 (25%)
tetraspanin_LEL 94..178 CDD:239401 26/130 (20%)
tsp-12NP_501853.1 Tetraspanin 38..293 CDD:459767 60/266 (23%)
tetraspanin_LEL 133..268 CDD:351888 29/157 (18%)

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