DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42El and LOC1275100

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:XP_314330.2 Gene:LOC1275100 / 1275100 VectorBaseID:AGAMI1_003177 Length:269 Species:Anopheles gambiae


Alignment Length:270 Identity:63/270 - (23%)
Similarity:109/270 - (40%) Gaps:81/270 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MG--CATGTIKYSLFLFNALWAILGILVLIFGGLG-W-------------------------GAM 37
            ||  |.:...|..|.:||.|:.:||.:||   |:| |                         .|:
Mosquito     1 MGCDCESCIAKTLLSVFNFLFFVLGTIVL---GVGVWLATDKTSFIALLKMVENDQLEHFTQPAV 62

  Fly    38 PDAYAIGILILGGTILVISLFGCCGAVRESPRMLWTYASLLLILLLL-IVAFIIL-----NPKDV 96
            .:..|..::::|..:..:|..|.|||:|||..:|.||...||::|:. :.||.:.     ..:..
Mosquito    63 IEQLAYLLIVIGSVMFFLSFLGYCGAIRESQCLLTTYGLFLLVILVAEVTAFGLAAAYKDRARTE 127

  Fly    97 FKKYALQTVENQW---ELEQTKPGSM--DIIQKTYYCCGRDSAQDYLDIKFWNNT-----VPSSC 151
            .|.|...|:.|.:   :..||...::  :.:....:|||.|..:|:...:.||.:     :|::|
Mosquito   128 TKNYLQTTISNYYTSNDRNQTDAVTLMWNYMMSELHCCGVDDYRDFALSEKWNESKRDKIIPTAC 192

  Fly   152 CKDDSCVNPL------------NLYVRGCLIKVEEAFADEATTLGYLEWGLLGFNAVIL------ 198
            |...|...|.            :.:.:||...:             ::|.:...|.||:      
Mosquito   193 CVQTSLFQPQDKNCPFSPTDSNSYFKKGCYNAL-------------IDWIMYNRNLVIIVAIGVG 244

  Fly   199 ---LLAIILA 205
               ||||.|:
Mosquito   245 LTQLLAIFLS 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 38/158 (24%)
tetraspanin_LEL 94..178 CDD:239401 20/105 (19%)
LOC1275100XP_314330.2 Tetraspanin 11..259 CDD:459767 60/260 (23%)
tetraspanin_LEL 125..222 CDD:351888 19/96 (20%)

Return to query results.
Submit another query.