DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42El and Cd53

DIOPT Version :10

Sequence 1:NP_523638.1 Gene:Tsp42El / 35622 FlyBaseID:FBgn0033134 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_031677.1 Gene:Cd53 / 12508 MGIID:88341 Length:219 Species:Mus musculus


Alignment Length:195 Identity:51/195 - (26%)
Similarity:88/195 - (45%) Gaps:31/195 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IKYSLFLFNALWAILGILVLIFG---------GLGWGAMPDAYAIG--ILILGGTILVISLFGCC 61
            :||.||:||.|:.:.|..:|.||         |:.:..:| ...:|  ::|:|..|:|::..||.
Mouse     9 LKYVLFIFNLLFWVCGCCILGFGIYFLVQNTYGVLFRNLP-FLTLGNILVIVGSIIMVVAFLGCM 72

  Fly    62 GAVRESPRMLWTYASLLLILLL-----LIVAFIILNPKDVFKKYALQTVENQWELEQTKPGSMDI 121
            |:::|:..:|.::..||||:||     .|:.|:.....:......|......:..:.:...:.|.
Mouse    73 GSIKENKCLLMSFFVLLLIILLAEVTIAILLFVYEQKLNTLVAEGLNDSIQHYHSDNSTMKAWDF 137

  Fly   122 IQKTYYCCGRDSAQDYLDIKFWNNTVPSSCCKDDSCVNPLNLYVRGCLIKVEEAFADEATTLGYL 186
            ||....|||.:.:.|      |.:..||||        |....|:||..|.:..|......:|.:
Mouse   138 IQTQLQCCGVNGSSD------WTSGPPSSC--------PSGADVQGCYNKAKSWFHSNFLYIGII 188

  Fly   187  186
            Mouse   189  188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42ElNP_523638.1 Tetraspanin 8..>130 CDD:459767 36/137 (26%)
tetraspanin_LEL 94..178 CDD:239401 19/83 (23%)
Cd53NP_031677.1 Tetraspanin 9..208 CDD:459767 51/195 (26%)
CD53_like_LEL 104..186 CDD:239417 20/95 (21%)

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