DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and tspan10

DIOPT Version :10

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:XP_001339579.3 Gene:tspan10 / 799194 ZFINID:ZDB-GENE-041111-201 Length:347 Species:Danio rerio


Alignment Length:244 Identity:52/244 - (21%)
Similarity:90/244 - (36%) Gaps:78/244 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SFPITPW-----KYGLLVTCILIVTCNVFFFSCGVTTWGSAVSVYGSYG----SALCGGAVFGVA 59
            ||..:.|     ||       |:::.|:.|     |..|.|..|.|.:|    .:.....:.|:.
Zfish    78 SFGTSGWSDYILKY-------LLISSNLLF-----TALGLATLVLGLWGLINKESFAQEKISGIG 130

  Fly    60 --------FLGMYVALKVS----------------YKYSIYYLICSGLVIAALGSYLFTFTAMRE 100
                    |||:.:||...                :..:::.|:.: .|:||:.  ||:..|..|
Zfish   131 TDPMLLFLFLGLVLALLSMTGCIGALRENMCLLRIFSAAVFLLVVA-QVLAAVA--LFSMQAQME 192

  Fly   101 QL--MGRFEE--RMRDLFERKTHSDDKMQPVHSLFGCCGIEGPQD------YLQEEHG----ALP 151
            ..  :|....  |.:|..:.:..:|:    :.:...|||.:..:|      |.....|    .:|
Zfish   193 DYLRLGMLTAIVRYQDDLDLRFITDE----IQTSLQCCGADTYRDWEINVYYNCSAPGVQACGVP 253

  Fly   152 SSCCYAFDCSKPAHVYEEGCSTKAVATLRMQAELNYYSCMAIIALEFLG 200
            .|||  .|..:...|:...|...|       .:|:.:|..::|   |||
Zfish   254 PSCC--IDPLENGTVWNSQCGVGA-------QQLDEFSAQSVI---FLG 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspanin 11..>135 CDD:459767 30/155 (19%)
tetraspanin_LEL 97..183 CDD:239401 20/99 (20%)
tspan10XP_001339579.3 None

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