DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Tspan11

DIOPT Version :10

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:199 Identity:48/199 - (24%)
Similarity:72/199 - (36%) Gaps:63/199 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 FFFSCGVTTWGSAVSVYG--------SYGSALC--------------GGAVFGVAFLGMYVALKV 69
            |||..|    |:||...|        .|.|.|.              ||.|....||| :.|:..
Mouse    25 FFFWVG----GAAVMAVGIWTLVEKSGYLSILASSTFAASAYILIFVGGLVMTTGFLG-FGAIIR 84

  Fly    70 SYKYSIYYLICSGLVI------AALGSYLFTFTAMREQLMGRFEERMRDLFERK-----THSDDK 123
            ..|..:....|..|||      |.:.:::: :..:.::|.......:.:.:.:.     |.|.|:
Mouse    85 EQKSCLSTYFCLLLVIFLVELVAGVLAHVY-YQRLSDELKWHLNSTLTEHYGQPRAAEITASVDR 148

  Fly   124 MQPVHSLFGCCGIEGPQDYLQEEHGA-----------LPSSCC--YAFDCSKPAH---VY--EEG 170
            :|   ..|.|||.....|:   :|.|           :|.|||  ....|.:.||   :|  |.|
Mouse   149 LQ---QDFKCCGSNSSADW---QHSAYILSQEALGRQVPDSCCKTVVARCGQRAHPSNIYKVEGG 207

  Fly   171 CSTK 174
            |..|
Mouse   208 CMAK 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspanin 11..>135 CDD:459767 31/140 (22%)
tetraspanin_LEL 97..183 CDD:239401 24/101 (24%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 48/199 (24%)
CD151_like_LEL 112..220 CDD:239408 24/107 (22%)

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