DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Tsp42Ea

DIOPT Version :9

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_525012.2 Gene:Tsp42Ea / 59178 FlyBaseID:FBgn0029508 Length:226 Species:Drosophila melanogaster


Alignment Length:222 Identity:54/222 - (24%)
Similarity:89/222 - (40%) Gaps:25/222 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYGLLVTCILIVTCNVFFFSCGVTTWGSAVSVYGSYGSAL-----------CGGAVFGVAFLGMY 64
            ||.|.:..:|...|.:.....|...: |.|.....:..||           .|..:..:::.|..
  Fly     9 KYILFIFNLLCSICGILLIVFGALLF-SKVRNMDDFAEALRTQQVPVTMIILGTIILLISWFGCC 72

  Fly    65 VALKVSYKYSI-YYLICSGLVIAALGSYLFTFTAMREQLMGRFEERMRDLFER----KTHSDDKM 124
            .|::.||..|: |.::...|:|..|...::.:....:.|     |.|.|:.|:    :|...|.|
  Fly    73 GAIRESYCMSMTYSILLFVLMIGQLALVIYMWVQKDKYL-----EIMGDVVEKAWNHRTSRSDYM 132

  Fly   125 QPVHSLFGCCGIEGPQDYLQEEHGALPSSCCYAFDCSKPAHVYEEGCSTKAVATLRMQAELNYYS 189
            ..:.....|||..|..||..:  |..|.|||...:..:...||..||....|......:::..|:
  Fly   133 DAIQISMKCCGRSGYTDYAYQ--GKFPPSCCSDTNNCRWETVYRRGCKVTFVEFWDRNSDIIKYA 195

  Fly   190 CMAIIALEFLGLFTAYHLGKA-RKYAK 215
            .:.|.|:||:|...|..|..: |.|.:
  Fly   196 GLVIAAIEFVGFVFACCLANSIRNYRR 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 52/216 (24%)
tetraspanin_LEL 97..183 CDD:239401 24/89 (27%)
Tsp42EaNP_525012.2 Tetraspannin 8..217 CDD:278750 52/215 (24%)
tetraspanin_LEL 104..188 CDD:239401 24/90 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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