DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and cd81a

DIOPT Version :9

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_571593.2 Gene:cd81a / 58031 ZFINID:ZDB-GENE-000831-5 Length:236 Species:Danio rerio


Alignment Length:158 Identity:37/158 - (23%)
Similarity:58/158 - (36%) Gaps:43/158 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CILIVTCNVFFFS-------C---GVTTW------------------GSAVSVYGSYGSALCGGA 54
            |...:...:|||:       |   ||:.|                  .|..:.|.|....:..||
Zfish     8 CTKCIKYMLFFFNFIFWLAGCVILGVSLWLRHDTKTSSLLDLKYEGTESPTTFYISVYILIAVGA 72

  Fly    55 V-FGVAFLGMYVALKVSYKYSIYYLICSGLVIA---ALGSYLF-TFTAMREQLMGRFEERMRDLF 114
            | ..|.|||.|.|::.|......:..|..|:.|   |.|.:.| ....:.::::| |.:.:.|  
Zfish    73 VMMFVGFLGCYGAIQESQCLLGTFFACLVLLFACEVAAGIWGFMNKDKISKEVIG-FYDSVYD-- 134

  Fly   115 ERKTHSDDKMQPV-------HSLFGCCG 135
            :..|::.|...|.       |....|||
Zfish   135 KGATYNTDNKNPATAVLKVFHETLQCCG 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 37/158 (23%)
tetraspanin_LEL 97..183 CDD:239401 10/46 (22%)
cd81aNP_571593.2 Tetraspannin 11..230 CDD:278750 36/155 (23%)
CD81_like_LEL 115..202 CDD:239404 11/51 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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