DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and tspan2a

DIOPT Version :9

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:122 Identity:29/122 - (23%)
Similarity:54/122 - (44%) Gaps:29/122 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VSVYGSYGSALCGGAVFGVAFLGMYVALKVSYKYSIYYLICSGLVIAA-LGSYLFTFTAMREQLM 103
            ::||...|:   ||.:..|.|.|.:.|::.|......:..|..|:..| :.:.:|.| ..::|::
Zfish    57 IAVYILIGA---GGIMMIVGFFGCFGAVRESQCLLGSFFACLLLIFGAEVAAGVFGF-LNKDQII 117

  Fly   104 GRFEERMRDLFERKTHSDDKMQ-------PVHSLFGCCG---------IEGPQDYLQ 144
                :.:::.:|..|    ||:       ..||:..|||         .||.:|.:|
Zfish   118 ----KEVQNYYESAT----KMENGTVITSAFHSVLDCCGTESSPIETCTEGNKDCVQ 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 29/122 (24%)
tetraspanin_LEL 97..183 CDD:239401 14/64 (22%)
tspan2aNP_001018160.1 Tetraspannin 10..204 CDD:278750 29/122 (24%)
tetraspanin_LEL 110..176 CDD:243179 15/66 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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