DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Tsp42En

DIOPT Version :9

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001260758.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster


Alignment Length:207 Identity:48/207 - (23%)
Similarity:80/207 - (38%) Gaps:29/207 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LIVTCNVFFFSCGVTTWGSAVSVYGSYGSA-------------LCGGAVFGVAFLGMYVALKVSY 71
            :::..||.....|||.  .|:|||....|.             ..|..|...:|||.:...:||.
  Fly    11 VLIVLNVLLSLIGVTL--IALSVYELNSSTPGTFEHIAIVVQIFVGTFVVLTSFLGCFATARVSL 73

  Fly    72 KYSIYYLICSGLVIAALGSYLFTFTAMREQLMGRFEERMRDLF-----ERKTHSDDKMQPVHSLF 131
            .....|:||. |::..|..|:.......:     :.||.:..|     :::|:. :::..:...:
  Fly    74 GLVWSYVICL-LILLCLQIYIIAAAHSTD-----YVERSKKDFLATWADQRTNV-ERISLLEQKY 131

  Fly   132 GCCGIEGPQDYLQEEHGALPSSCCYAFDCSKPAHVYEEGCSTKAVATLRMQAELNYYSCMAIIAL 196
            .|||..|..||:....| :|.| ||.....:...::..||.....|.......:.......::.:
  Fly   132 SCCGQLGAHDYILMGRG-IPLS-CYKDQERREYSLFSGGCLQAVQAHATDNVAIGLIIKWLLLLV 194

  Fly   197 EFLGLFTAYHLG 208
            ||..|..|.|||
  Fly   195 EFAALGAATHLG 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 48/207 (23%)
tetraspanin_LEL 97..183 CDD:239401 18/90 (20%)
Tsp42EnNP_001260758.1 Tetraspannin 8..199 CDD:278750 43/198 (22%)
tetraspanin_LEL 96..180 CDD:239401 18/91 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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