DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Tsp42Ek

DIOPT Version :9

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001246161.1 Gene:Tsp42Ek / 35621 FlyBaseID:FBgn0033133 Length:215 Species:Drosophila melanogaster


Alignment Length:177 Identity:48/177 - (27%)
Similarity:77/177 - (43%) Gaps:24/177 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YGSALCGGAVFGVAFLGM------YVALKVSYKYSIYYLICSGLVIAALGSYLFTFTAMREQLMG 104
            ||   .||.:|..|.||.      .|.:..:|.    :|:.:.|:|:.||.:.|.||   |:.:.
  Fly    46 YG---LGGIIFVSAVLGCCGICMENVCMTATYG----FLLLAQLIISLLGIFRFKFT---EEYIE 100

  Fly   105 RF-EERMRDLFERKTHSDDKMQPVHSLFGCCGIEGPQDYLQEEHGALPSSCCYAFDCSKPAHVYE 168
            :| .|.::..::.:......|....:::.|||.:.|.||:......||.||....|...| | |.
  Fly   101 KFAAEEVQMKWDEELVEPGAMDIYQTVYECCGRDSPDDYVAIGRQTLPPSCYPQEDPQMP-H-YL 163

  Fly   169 EGC---STKAVATLRMQAELNYYSCMAIIALEFLGLFTAYHLGKARK 212
            .||   |::....|...|....:..:.|..|..:..|  |.:|:.||
  Fly   164 AGCVQKSSENFVVLFSYAHDTNWIALGITILMMIAAF--YLVGRFRK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 46/174 (26%)
tetraspanin_LEL 97..183 CDD:239401 22/89 (25%)
Tsp42EkNP_001246161.1 Tetraspannin 7..202 CDD:278750 44/169 (26%)
tetraspanin_LEL 94..174 CDD:239401 23/84 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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