DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Tsp42Ed

DIOPT Version :10

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_523630.1 Gene:Tsp42Ed / 35613 FlyBaseID:FBgn0029507 Length:227 Species:Drosophila melanogaster


Alignment Length:218 Identity:47/218 - (21%)
Similarity:87/218 - (39%) Gaps:39/218 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYGLLVTCILIVTCNVFFFSCGVTTWGSAVSVYGSYGSA-----------LCGGAVFGVAFLGMY 64
            ||.|.:..||.|.|.:...:.| :...|.:..:...|..           :.|..||.|||:|..
  Fly     9 KYVLFIFNILFVICGILLITFG-SIMVSTIKDFSGVGETFTANSVAIIILVLGCVVFLVAFMGCC 72

  Fly    65 VALKVS----YKYSIYYLICSGLVIAALGSYLFTFTAMREQLMGRFEERMRDLFERKTHSDDKMQ 125
            .|::.:    ..||:..|:   |:::.|...::.:.. ..|:....|:.::.:::::......|.
  Fly    73 GAIRENSCALTSYSVVMLV---LLVSQLALIIYVWVD-HVQIQQSLEKIVQTIWDQRKTDALLMD 133

  Fly   126 PVHSLFGCCGIEGPQDYLQEEHG-ALPSSCCYAFDCSKPAH-------VYEEGCSTKAVATL-RM 181
            .:...|.|||:.|..||     | ..|:||     |..|::       |.......|||.:. ..
  Fly   134 TLQRSFKCCGLNGFADY-----GITYPASC-----CDSPSNGTCALTQVMTRSSCLKAVDSFWDT 188

  Fly   182 QAELNYYSCMAIIALEFLGLFTA 204
            ...:..|:.:.:.|:|.:....|
  Fly   189 NVSIIKYAGLGVTAVELVAFIFA 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspanin 11..>135 CDD:459767 28/138 (20%)
tetraspanin_LEL 97..183 CDD:239401 20/94 (21%)
Tsp42EdNP_523630.1 Tetraspanin 8..216 CDD:459767 47/218 (22%)

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