DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Tsp29Fb

DIOPT Version :9

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001137809.1 Gene:Tsp29Fb / 34212 FlyBaseID:FBgn0032075 Length:308 Species:Drosophila melanogaster


Alignment Length:245 Identity:54/245 - (22%)
Similarity:95/245 - (38%) Gaps:48/245 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYGLLVTCILIVTCNVFFFSCGV---TTWGS-AVSVYGSYGS--AL---CGGAVFGVAFLGMYVA 66
            ||.|::...:.....:.....|.   |.:|. ::.:.|.:.|  ||   .|..:..||.||.|.|
  Fly    16 KYMLIIVSFMFALTAILLIMVGTTIQTIFGDFSLFIDGHFSSPPALLIAIGFILIAVAALGAYGA 80

  Fly    67 LKVSYKYSIYYLICSGLVI-----AALGSYLFTFTAMREQLMGRFEERMRDL---FERKTHSDDK 123
            :|.|......|.:|..||.     ||:.:::     |:.|:.|.....|...   :|...:.:..
  Fly    81 VKESVMVINLYGVCLFLVFILEVSAAIAAFV-----MQSQVRGMLIRTMNQALAEYEHDPYVESG 140

  Fly   124 MQPVHSLFGCCGIEGPQDY-----------LQEEHGALPSSCCYAFDCSKPA-----------HV 166
            :..:.|:..|||:..|:|:           |..:...:|:|||    .::|.           ..
  Fly   141 VDFMQSMLECCGVNEPEDWKDYLSANVNFTLGVDDVVVPNSCC----GNQPTSLNDSTQMTCMET 201

  Fly   167 YEEGCSTKAVATLRMQAELNYYSCMAIIALEFLGLFTAYHLGKARKYAKT 216
            |:.||..|....:...|.|.......:..::.||:..|:.|.|..:..|:
  Fly   202 YDYGCFRKMNFIVSQSAMLIATGATTVAFVQLLGVLCAFMLAKTLRRNKS 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 53/238 (22%)
tetraspanin_LEL 97..183 CDD:239401 21/110 (19%)
Tsp29FbNP_001137809.1 Tetraspannin 14..246 CDD:278750 53/238 (22%)
tetraspanin_LEL 110..218 CDD:239401 21/116 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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