DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Cd81

DIOPT Version :9

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_037219.2 Gene:Cd81 / 25621 RGDID:2315 Length:236 Species:Rattus norvegicus


Alignment Length:138 Identity:30/138 - (21%)
Similarity:46/138 - (33%) Gaps:54/138 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LCGGAVFGVAF---------------LGMYVALKVSYKYSIYYLICSGLVIAALGSYLFTFTAMR 99
            |.||.:.|||.               ||...|....| ..||.||..|.|:..:| :|..:.|::
  Rat    23 LAGGVILGVALWLRHDPQTTSLLYLELGDKPAPSTFY-VGIYILIAVGAVMMFVG-FLGCYGAIQ 85

  Fly   100 EQ--LMGRF----------------------EERMRDL-------FERKTHSDDK------MQPV 127
            |.  |:|.|                      ::..:|:       .::....||.      ::..
  Rat    86 ESQCLLGTFFTCLVILFACEVAAGIWGFVNKDQIAKDVKQFYDQALQQAVMDDDANNAKAVVKTF 150

  Fly   128 HSLFGCCG 135
            |....|||
  Rat   151 HETLNCCG 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspannin 11..211 CDD:278750 30/138 (22%)
tetraspanin_LEL 97..183 CDD:239401 12/76 (16%)
Cd81NP_037219.2 Tetraspannin 10..226 CDD:395265 30/138 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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