DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ej and Cd9

DIOPT Version :10

Sequence 1:NP_523636.1 Gene:Tsp42Ej / 35620 FlyBaseID:FBgn0033132 Length:227 Species:Drosophila melanogaster
Sequence 2:XP_063141640.1 Gene:Cd9 / 24936 RGDID:2318 Length:249 Species:Rattus norvegicus


Alignment Length:106 Identity:21/106 - (19%)
Similarity:47/106 - (44%) Gaps:19/106 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 GSAVSVYGSYGSALCGGAVFGVAFLGMYVALKVSYKYSIYYLICSGLVIAALGSYLFTFTAMREQ 101
            |:.:.:.|..|  .||........||::..         :.|:...:.|||.   ::.:| .:::
  Rat    65 GALMMLVGFLG--CCGAVQESQCMLGLFFG---------FLLVIFAIEIAAA---VWGYT-HKDE 114

  Fly   102 LMGRFEERMRDLFERKTHSD----DKMQPVHSLFGCCGIEG 138
            ::...:|..:|.:::..:.|    :.::.:|....||||.|
  Rat   115 VIKELQEFYKDTYQKLRNKDEPQRETLKAIHMALNCCGIAG 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EjNP_523636.1 Tetraspanin 11..>135 CDD:459767 17/101 (17%)
tetraspanin_LEL 97..183 CDD:239401 9/46 (20%)
Cd9XP_063141640.1 None

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