DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and TSPAN18

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_005253274.1 Gene:TSPAN18 / 90139 HGNCID:20660 Length:258 Species:Homo sapiens


Alignment Length:260 Identity:53/260 - (20%)
Similarity:96/260 - (36%) Gaps:69/260 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKN---VAGG-LIIALGVVILIIAIFGC 68
            :|:::.:.||...:.|..|:|.||:.::........:..|   :.|. :::|:|.::.::...||
Human    19 MKYLMFVFNFFIFLGGACLLAIGIWVMVDPTGFREIVAANPLLLTGAYILLAMGGLLFLLGFLGC 83

  Fly    69 LAAIHEAPVRLLIYVGAVVLLILAQL-------IF------------LGMSSHGTKDGISGSINE 114
            ..|:.|....||.:...::::.||:|       ||            |.....|..|      .:
Human    84 CGAVRENKCLLLFFFLFILIIFLAELSAAILAFIFRENLTREFFTKELTKHYQGNND------TD 142

  Fly   115 GFDRLWESERNQTGALSYYESWLQCCGVNSSEDY---------WIIHHGIPSSCC---PESK--- 164
            .|...|.|.....|          |||||..||:         .:....:|.:||   |:|:   
Human   143 VFSATWNSVMITFG----------CCGVNGPEDFKFASVFRLLTLDSEEVPEACCRREPQSRDGV 197

  Fly   165 ------CMDTPSRVF-KTGCKAAFVKYLDDKLLVFKIVCWLLVIG----EAVGAVFGWLLYSSVK 218
                  |:...|... |.||....:...:    .:..:...|.||    |....:|...|:..::
Human   198 LLSREECLLGRSLFLNKQGCYTVILNTFE----TYVYLAGALAIGVLAIELFAMIFAMCLFRGIQ 258

  Fly   219  218
            Human   259  258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 52/254 (20%)
TSPAN18XP_005253274.1 Tetraspanin 20..255 CDD:459767 53/254 (21%)
uroplakin_I_like_LEL 115..228 CDD:239409 26/132 (20%)

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