DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Cd82

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_113985.2 Gene:Cd82 / 83628 RGDID:69070 Length:266 Species:Rattus norvegicus


Alignment Length:217 Identity:50/217 - (23%)
Similarity:96/217 - (44%) Gaps:45/217 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGATTV-KHVLLLLNFVFSVLGLALIAFGIFFL---------ISAAENAVSIGKNVAGGLIIA 55
            ||.|...| |:.|.|.|.:|.:||..::.||::.|         :..:.:::.:|..|    .|.
  Rat     1 MGAGCVKVTKYFLFLFNLLFFILGAVILGFGVWILADKSSFISVLQTSSSSLQVGAYV----FIG 61

  Fly    56 LGVVILIIAIFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSI-NEGFDRL 119
            :|.:.:::...||:.|::|....|.:|...::|:::|| :.:|:..:...|.:...: |...|.:
  Rat    62 VGAITMLMGFLGCIGAVNEVRCLLGLYFVFLLLILIAQ-VTVGVLFYFNADKLKQEMGNTVMDII 125

  Fly   120 WESERNQTG----ALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKTGCKAA 180
            .....|.:.    |..|.::.::|||       |:    .||:.        |.:.|.|...|..
  Rat   126 QNYSVNASSSREEAWDYVQAQVKCCG-------WV----SPSNW--------TRNPVLKNSTKTT 171

  Fly   181 F------VKYLDDKLLVFKIVC 196
            :      .|..|::|:|.|..|
  Rat   172 YPCSCEKTKEEDNQLIVKKGFC 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 47/210 (22%)
Cd82NP_113985.2 Tetraspanin 24..253 CDD:459767 40/194 (21%)
CD37_CD82_like_LEL 106..228 CDD:239413 22/107 (21%)

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