DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan13a

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001002334.1 Gene:tspan13a / 798836 ZFINID:ZDB-GENE-040718-19 Length:203 Species:Danio rerio


Alignment Length:235 Identity:51/235 - (21%)
Similarity:85/235 - (36%) Gaps:54/235 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GATTVKHVLLLLNFVFSVLGLALI---AFGIFFLISAAENAVSIGKNVAGGLIIALGVVILIIAI 65
            |....|..|.:||.::.::.|.||   |:|.:|.:.::.:.:        |.:||:|:.:.|:||
Zfish     5 GFVCSKTCLCILNLIYVLVSLLLIGVAAWGKWFGLVSSFSVM--------GAVIAVGLFLFIVAI 61

  Fly    66 FGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISG---SINEGFDRL-----WES 122
            .|...|:....|.|..|:..:.|:.:.|.            .:|.   :||:....|     |..
Zfish    62 IGLCGAVKHHQVLLFFYMFILFLVFIVQF------------SVSCACLAINKEQQNLLLEIGWNK 114

  Fly   123 ERNQTGALSYYESWLQCCGVNSSEDYWIIHH--GIPSSCCPESKCMDTPSRVFKTGCKAAFVKYL 185
            ..:....|   |..|.||      |:..:.:  ...::|..|..|..         |......|.
Zfish   115 SESMQSDL---ERSLNCC------DFLQVDYSGSCEATCFKEKTCKP---------CSVIIQAYA 161

  Fly   186 DDKLLVFKIVCWLLVIGEAVGAVFGWLLYSSVKNQSRRNN 225
            ||.|.....:.......|.:|.   ||.|.....:..|.|
Zfish   162 DDALQFVGGISLFFSFTEILGF---WLAYRYRNQKDHRQN 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 47/218 (22%)
tspan13aNP_001002334.1 Tetraspanin 9..189 CDD:459767 48/220 (22%)

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