DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan34a

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001038906.2 Gene:tspan34a / 751731 ZFINID:ZDB-GENE-060825-202 Length:243 Species:Danio rerio


Alignment Length:247 Identity:56/247 - (22%)
Similarity:98/247 - (39%) Gaps:49/247 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFF------LISAAENAVSIGKNVA-----GGLIIALGVVIL 61
            :|.::.:.|.:..:.|.|::|.||:.      |:...|:.......:|     |.|:|.:|..:.
Zfish     7 LKVMMFVFNGIIFLAGAAVLAVGIWVAVDRVSLLGFLEHIEDAPPELAQLANIGYLLIGVGAFLA 71

  Fly    62 IIAIFGCLAAIHEAPVRLLIY------------VGAVVLLILAQLIFLGMSSHGTKDGISGSI-- 112
            |:...||..|:.|:...||.:            ..||||.:...::...::..|.|  ::.||  
Zfish    72 IMGFLGCCGAVKESKCMLLTFFIIVLIIFLVEVAAAVVLFVFEPVVQETLNEIGQK--VAKSIKD 134

  Fly   113 ----NEGFDRLWESERNQTGALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVF 173
                :|.|..:|.:..|:          |:|||.|:..|:...:....:|..||..|.....|..
Zfish   135 NYGKDEPFSSIWNTTMNE----------LKCCGYNNYTDFSGSNFVEETSMYPEKCCSSGSQRCD 189

  Fly   174 K--------TGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSSV 217
            :        .||....||.::|..|:...|...:...|....|...:||.:|
Zfish   190 ERAAEDAVIAGCFRTLVKLIEDNALLLAGVALGIAALEIAAMVVSMILYKNV 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 53/242 (22%)
tspan34aNP_001038906.2 Tetraspanin 7..239 CDD:459767 54/243 (22%)
tetraspanin_LEL <134..213 CDD:239401 20/88 (23%)

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