DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and UPK1B

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_008883.2 Gene:UPK1B / 7348 HGNCID:12578 Length:260 Species:Homo sapiens


Alignment Length:269 Identity:48/269 - (17%)
Similarity:89/269 - (33%) Gaps:95/269 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 VLLLLNFVFSVLGLALIAFGIFF---------LISAAENAVSIGKNVAGGLIIALGVVILIIAIF 66
            :|:..|.:....|:||.|..|||         |:.|.:|....|   |..:.|.:|:.:..:::.
Human    14 LLIFGNVIIGCCGIALTAECIFFVSDQHSLYPLLEATDNDDIYG---AAWIGIFVGICLFCLSVL 75

  Fly    67 GCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSI------------------- 112
            | :..|.::..::|:....::.::.|..:...:::...:|..:.::                   
Human    76 G-IVGIMKSSRKILLAYFILMFIVYAFEVASCITAATQQDFFTPNLFLKQMLERYQNNSPPNNDD 139

  Fly   113 ---NEGFDRLWESERNQTGALSYYESWLQCCGVNSSEDY-----------------WIIHHGIPS 157
               |.|..:.|:....|.          .|||||...|:                 |      |.
Human   140 QWKNNGVTKTWDRLMLQD----------NCCGVNGPSDWQKYTSAFRTENNDADYPW------PR 188

  Fly   158 SCCP----------ESKCMDTPSRVFKTGC----------KAAFVKYLDDKLLVFKIVCWLLVIG 202
            .||.          |:..:..|......||          .|..|.:..     |.|:||...: 
Human   189 QCCVMNNLKEPLNLEACKLGVPGFYHNQGCYELISGPMNRHAWGVAWFG-----FAILCWTFWV- 247

  Fly   203 EAVGAVFGW 211
             .:|.:|.|
Human   248 -LLGTMFYW 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 48/269 (18%)
UPK1BNP_008883.2 Tetraspanin 14..>161 CDD:459767 26/160 (16%)
uroplakin_I_like_LEL 118..230 CDD:239409 18/127 (14%)

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