DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan36

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001037876.1 Gene:tspan36 / 733459 XenbaseID:XB-GENE-5730963 Length:240 Species:Xenopus tropicalis


Alignment Length:245 Identity:50/245 - (20%)
Similarity:107/245 - (43%) Gaps:55/245 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGATTVKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNVAGG--------LIIALG 57
            ||:...|.|..|||::.:|....:.|...||..:::..:.     :|:.|.        :|:|:.
 Frog     1 MGIALFTSKTFLLLVSLIFLAASVGLAYVGISTIVTYKQY-----ENLLGNMYVMLPSVIILAIA 60

  Fly    58 VVILIIAIFGCLAAIHEAPVRL--------LIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINE 114
            ||:.:|||.||.:...|:...|        :|:...|..:||. |:|:        |.|:..:.:
 Frog    61 VVMFVIAILGCCSTTQESCCGLGCFMFLISIIFAAGVAAMILG-LVFV--------DKINPELEK 116

  Fly   115 GFDRLWESERN---QTGALSYYESWLQCCGVNS-----SEDYWIIHHGIPSSCCPES-----KCM 166
            ..|.|:::...   .:..:.:.:..|:|||..:     ..|::..:..:|.|||.::     :.:
 Frog   117 NMDNLFKTYNGVDVSSSTVDFIQERLECCGRKNYTDWEETDWYQTNKSLPMSCCKKNAQDCQRVI 181

  Fly   167 DTPSRVFKTGCKAAFVKYLDDKL--LVFKIVCW--LLVIGEAVGAVFGWL 212
            .....::...|        :.||  |:.:::.:  .:::|.|:..:|..:
 Frog   182 GQQKDIYTEAC--------EPKLENLIHQVLRYSMFVILGFAIVELFAMI 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 47/238 (20%)
tspan36NP_001037876.1 Tetraspanin 8..230 CDD:459767 47/238 (20%)
tetraspanin_LEL 103..205 CDD:351888 19/118 (16%)

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