DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ei and Tspan11

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_081019.1 Gene:Tspan11 / 68498 MGIID:1915748 Length:253 Species:Mus musculus


Alignment Length:231 Identity:56/231 - (24%)
Similarity:101/231 - (43%) Gaps:31/231 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKN---VAGGLIIALGVVILIIAIFGCL 69
            :|::|.:.||.|.|.|.|::|.||:.|:..:.....:..:   .:..::|.:|.:::.....|..
Mouse    16 LKYLLFIFNFFFWVGGAAVMAVGIWTLVEKSGYLSILASSTFAASAYILIFVGGLVMTTGFLGFG 80

  Fly    70 AAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSH----GTKDGISGSINEGFDRLWESER--NQTG 128
            |.|.|....|..|...::::.|.:|: .|:.:|    ...|.:...:|......:...|  ..|.
Mouse    81 AIIREQKSCLSTYFCLLLVIFLVELV-AGVLAHVYYQRLSDELKWHLNSTLTEHYGQPRAAEITA 144

  Fly   129 ALSYYESWLQCCGVNSSEDYW----------IIHHGIPSSCCPE--SKCMDT--PSRVFKT--GC 177
            ::...:...:|||.|||.| |          .:...:|.|||..  ::|...  ||.::|.  ||
Mouse   145 SVDRLQQDFKCCGSNSSAD-WQHSAYILSQEALGRQVPDSCCKTVVARCGQRAHPSNIYKVEGGC 208

  Fly   178 KAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLL 213
            .|...:::.|.||:...|    .||.|...:.|.:|
Mouse   209 MAKLEQFVADHLLLMGAV----GIGVACLQICGMVL 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 56/231 (24%)
Tspan11NP_081019.1 Tetraspanin 16..244 CDD:459767 56/231 (24%)
CD151_like_LEL 112..220 CDD:239408 25/108 (23%)

Return to query results.
Submit another query.