DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Tspan15

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001108504.1 Gene:Tspan15 / 679462 RGDID:1588304 Length:294 Species:Rattus norvegicus


Alignment Length:258 Identity:51/258 - (19%)
Similarity:105/258 - (40%) Gaps:76/258 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 TVKHVLLLLNFVFSVLGLALIAFGIFF--------LISAAENAVSIGKNVAGGLIIALGVVILII 63
            ::|..|::.:.||.::|..:::.||:.        .:.:|..|.:|       ::|.||||:.|:
  Rat    19 SLKFSLIIYSTVFWLIGGLVLSVGIYAEAERQKYKTLESAFLAPAI-------ILILLGVVMFIV 76

  Fly    64 AIFGCLAAIHEAPVRLLIY------------VGAVVLLILAQLIFLGMSSHGTKDGISGSINEGF 116
            :..|.||::.:....|..:            :|.:|.||.         .:.|.|.::.:|..|.
  Rat    77 SFIGVLASLRDNLCLLQSFMFILGLCLVMELIGGIVALIF---------RNQTIDFLNDNIRRGI 132

  Fly   117 DRLWESERNQTGALSYYESWLQCCGVNSSEDY--WIIHH------------GIPSSCC------- 160
            :..:: :.:....:.:.:...:|||   .|||  |..:.            |:|.:||       
  Rat   133 ENYYD-DLDFKNIMDFVQKKFKCCG---GEDYRDWSKNQYHDCSAPGPLACGVPYTCCIRNTTDV 193

  Fly   161 PESKC---------MDTPSRVFKTGC-KAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLL 213
            ..:.|         ::..:.:...|| .|..:.::|:    :.|:..|| :|..:....|.||
  Rat   194 VNTMCGYKTIDKERLNAQNIIHVRGCTNAVLIWFMDN----YSIMAGLL-LGILLPQFLGVLL 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 51/257 (20%)
Tspan15NP_001108504.1 Tetraspanin 20..>157 CDD:459767 31/156 (20%)
penumbra_like_LEL 114..231 CDD:239411 22/133 (17%)

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