DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Tspan13

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_079635.1 Gene:Tspan13 / 66109 MGIID:1913359 Length:204 Species:Mus musculus


Alignment Length:238 Identity:55/238 - (23%)
Similarity:96/238 - (40%) Gaps:50/238 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GATTVKHVLLLLNFVFSVLGLALI---AFGIFFLISAAENAVSIGKNVAGGLIIALGVVILIIAI 65
            |.:..|:.|..||.:::::.|.||   |:||.|.:.::...|        |::||:|:.:.:||:
Mouse     5 GFSCSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVV--------GVVIAVGIFLFLIAL 61

  Fly    66 FGCLAAIHEAPVRLLIYVGAVVLLILAQL------IFLGMSSHGTKDGISGSINEGFDRLWESER 124
            .|.:.|:....|.|..|:..::|:.:.|.      :.|.....|              :|.|...
Mouse    62 VGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNREQQG--------------QLLEVGW 112

  Fly   125 NQT-GALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKTGCKAAFVKYLDDK 188
            |.| .|.:..:..|.|||..|..         |:..||.| |..:..:.  :.|.....:|..:.
Mouse   113 NNTASARNDIQRNLNCCGFRSYN---------PNDTCPAS-CAKSTQKC--SSCAPIIGEYAGEV 165

  Fly   189 LLVFKIVCWLLVIGEAVGAVFGWLLYSSVKNQS--RRNNAVWM 229
            |.....:.......|.:|.   ||.| ..:||.  |.|.:.::
Mouse   166 LRFVGGIGLFFSFTEILGV---WLTY-RYRNQKDPRANPSAFL 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 49/215 (23%)
Tspan13NP_079635.1 Tetraspanin <55..190 CDD:459767 34/164 (21%)

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