DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Tspan4

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001390287.1 Gene:Tspan4 / 64540 MGIID:1928097 Length:333 Species:Mus musculus


Alignment Length:231 Identity:57/231 - (24%)
Similarity:108/231 - (46%) Gaps:30/231 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNV----AGGLIIALGVVILIIAIFGC 68
            ||:::...|.:|.:.|..::..|| :|.:...|..::..:.    |..|:|..|..::.|...||
Mouse   104 VKYLMFAFNLLFWLGGCGVLGVGI-WLAATQGNFATLSSSFPSLSAANLLIVTGTFVMAIGFVGC 167

  Fly    69 LAAIHEAPVRLLIYVGAVVLLILAQ----LIFLGMS----SHGTKDGISGSINEGFDRLWESERN 125
            :.|:.|....||.:...::|:.|.:    ::|...|    |:..:|     :.:|. .|:.::.|
Mouse   168 IGALKENKCLLLTFFVLLLLVFLLEATIAVLFFAYSDKIDSYAQQD-----LKKGL-HLYGTQGN 226

  Fly   126 --QTGALSYYESWLQCCGVNSSEDYWIIHHG--IPSSCCPE--SKC-MDTPSRVFKTGCKAAFVK 183
              .|.|.|..::..:||||::..|::.:::.  :|.|||.|  ..| :..|...:|:.|......
Mouse   227 VGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSCCLEFSDSCGLHEPGTWWKSPCYETVKA 291

  Fly   184 YLDDKLLVFKI--VCWLLVIGEAVGAVFGWLLYSSV 217
            :|.:.||...|  :|..||  :.:|..|...:|..|
Mouse   292 WLQENLLAVGIFGLCTALV--QILGLTFAMTMYCQV 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 55/226 (24%)
Tspan4NP_001390287.1 Tetraspanin 104..323 CDD:459767 55/227 (24%)
NET-5_like_LEL 200..297 CDD:239418 24/102 (24%)

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