DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan33b

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_005159085.1 Gene:tspan33b / 567512 ZFINID:ZDB-GENE-060503-607 Length:266 Species:Danio rerio


Alignment Length:259 Identity:55/259 - (21%)
Similarity:105/259 - (40%) Gaps:61/259 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIF-------------FLISAAENAVSIGKNVAGGLIIALGVV 59
            :::.|...:|:|.|..|.::|.|::             |||..|.            ::|.:|||
Zfish    20 IRYFLFFFSFLFWVFSLLIVAIGVYAKAQKATDTVRDSFLIDPAV------------ILIVVGVV 72

  Fly    60 ILIIAIFGCLAAIHEAPVRLL-IYVGAVVLLILAQ--LIFLG-MSSHGTKDGISGSINEGFDRLW 120
            :..|...||:.|:.| .:||| |:..::.|:.|.|  :..|| ..|..|:|.:...:.:.... :
Zfish    73 MFFITFCGCIGALRE-NIRLLKIFSFSLTLVFLTQMAIAILGFFYSEQTRDALGEFVKKAIVH-Y 135

  Fly   121 ESERNQTGALSYYESWLQCCGVNSSEDY-WIIHH------------GIPSSCCP--------ESK 164
            ..:.:....:.|.:...:|||..:..|: |..:.            .:|.|||.        .|.
Zfish   136 RDDLDLQNLMDYIQKEFKCCGWTNYTDWSWNPYFNCSSSNPSNERCSVPFSCCTPLPRETVINSM 200

  Fly   165 C---------MDTPSRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSSVKN 219
            |         ::....::..||....|.:::..||:|..:...|.:.:..|.|...:|.|.:::
Zfish   201 CGFGIQTQNHLNATKSIYSVGCADRAVIWIESHLLLFGALTLGLALPQIAGIVLSQILISEIRS 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 53/252 (21%)
tspan33bXP_005159085.1 Tetraspanin 36..>156 CDD:459767 30/133 (23%)
penumbra_like_LEL 114..234 CDD:239411 18/120 (15%)

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