DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and prph2b

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_571642.1 Gene:prph2b / 559209 ZFINID:ZDB-GENE-000616-9 Length:342 Species:Danio rerio


Alignment Length:308 Identity:63/308 - (20%)
Similarity:101/308 - (32%) Gaps:115/308 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKN---VAGGLIIALGVVILIIAIFG---CLA 70
            |.||.::..:.|:.:.:.|||..|...:.:..:..|   ....|:|.:|:|...:..||   |  
Zfish    20 LWLLYWLSVMAGILIFSTGIFLKIELRKRSEMMDNNESHFVPNLLILVGLVACGVNTFGGKVC-- 82

  Fly    71 AIHEA---------PVRLLIYVG-----AVVLLILAQLIFL-GMSSH-----GTKDGISGSINEG 115
              |::         ...|..|:.     .:||.:.|.|.|| .:|.|     |.|:|:.      
Zfish    83 --HDSLDTVKFTKWKTMLKAYMSGCVIFCIVLFVTALLCFLMQISLHFALAEGLKNGMK------ 139

  Fly   116 FDRLWESERNQTG------ALSYYESWLQCCGVNSSEDY----WI-------------------- 150
                :..:.:..|      .|...:...:|||.|:.:|:    ||                    
Zfish   140 ----YYKDTDTPGRCFMKRTLDMTQIEFRCCGNNNYKDWFEIQWISNRYLDFSNDEIKDRVQSNV 200

  Fly   151 ----IHHGIPSSCC-PES--KCMD----------------TPSRVFKTGCKAAFVKYLDDKLLVF 192
                :...:|.||| |.|  .|:.                ....|:..||:.|.|.|....:...
Zfish   201 EGKFLMDSVPFSCCNPGSPRPCIQHHLTNNSAHYSYDHHTEDLNVWTRGCREALVSYYGGMMNSI 265

  Fly   193 KIVCWLLVIGEAVGAV----------------------FGWLLYSSVK 218
            .....|.:|.:||..|                      .||||..|:|
Zfish   266 GAFVLLFIIMQAVVTVGLQYLSTSLETLTDPENPESESEGWLLEKSLK 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 60/302 (20%)
prph2bNP_571642.1 Tetraspanin 16..>167 CDD:459767 33/160 (21%)
peripherin_like_LEL 120..262 CDD:239415 29/151 (19%)

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