DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan4b

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001076276.1 Gene:tspan4b / 556934 ZFINID:ZDB-GENE-070410-127 Length:232 Species:Danio rerio


Alignment Length:233 Identity:51/233 - (21%)
Similarity:100/233 - (42%) Gaps:42/233 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENA---VSIGKNVAGGLIIALGVVILIIAIFGCL 69
            ||:::.:.|.:|.:.|..|...|::...:.:|.:   :|.....|..|::..|.|.::....|||
Zfish    11 VKYLMFVFNLIFWLGGCGLFGVGVWLAFTQSEFSSLPLSFPSLSAANLLLVAGGVTMVTGFLGCL 75

  Fly    70 AAIHEAPVRLLIYVGAVVLLILAQLIFLGMSS-----------HGTKDGISG-SINEGFDRLWES 122
            .|:.|....||.:...:::|:|.:::.:.:.|           ...::|:.| |.|:|..:.|::
Zfish    76 GALKEQKCLLLTFFVILLILVLTEVVLILVLSLYHEELDKKAKDDLREGMKGYSKNDGLRKSWDN 140

  Fly   123 ERNQTGALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPS--RVFKTGCKAAFVKYL 185
                      .:...:||||::..|:   |:.......|.|.|.:.||  |.::..|      |.
Zfish   141 ----------MQMIFKCCGVSNHTDW---HNKTTDGKLPGSCCSNDPSSCRHWEEPC------YE 186

  Fly   186 DDKLLVFKIVCWLLVIGEAVG------AVFGWLLYSSV 217
            ..|..:...:..:|..|..:|      .||..|:|..:
Zfish   187 KAKQWLLTNITSVLGFGVCIGIVQLLALVFSMLMYCQI 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 50/228 (22%)
tspan4bNP_001076276.1 Tetraspanin 11..222 CDD:459767 50/229 (22%)
NET-5_like_LEL 108..196 CDD:239418 21/106 (20%)

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