DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ei and Tspan14

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_666040.1 Gene:Tspan14 / 52588 MGIID:1196325 Length:270 Species:Mus musculus


Alignment Length:248 Identity:59/248 - (23%)
Similarity:95/248 - (38%) Gaps:67/248 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KHVLLLLNFVFSVLGLALIAFGIFFLISAAENAV-----------SIGKNVAGGLIIALGVVILI 62
            |::|...|.||.:.|:..:..|::   :.:|..|           .|...|   |::.:|||:..
Mouse    16 KYLLFSYNIVFWLAGVVFLGVGLW---AWSEKGVLSDLTKVTRLHGIDPVV---LVLMVGVVMFT 74

  Fly    63 IAIFGCLAAIHEAPVRLLIYVGAVVL-----LILAQLIFLGMSSHGTKDGISGSINEGFDRLWES 122
            :...||:.|:.|....|..:.||:||     |.:|.|.||      .:|.:.....|.|:...:|
Mouse    75 LGFAGCVGALRENICLLKFFCGAIVLIFFLELAVAVLAFL------FQDWVRDRFREFFESNIKS 133

  Fly   123 ERNQTGALSYYESWL---QCCGVNSSEDYWIIH--------------HGIPSSCC---PESKCMD 167
            .|:.....:..:|..   ||||....|| |.::              .|:|.|||   |..|.::
Mouse   134 YRDDIDLQNLIDSLQKANQCCGAYGPED-WDLNVYFNCSGASYSREKCGVPFSCCVPDPAQKVVN 197

  Fly   168 T--------------PSRVFKTGCKAAFVKYLDDKLL----VFKIVCWLLVIG 202
            |              ...:|..||..|...:|...:.    ||..:..|.:.|
Mouse   198 TQCGYDVRIQLKSKWDEFIFTKGCIQALEGWLPRNIYIVAGVFIAISLLQIFG 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 59/248 (24%)
Tspan14NP_666040.1 Tetraspanin 16..258 CDD:459767 59/248 (24%)
TM4SF9_like_LEL 113..233 CDD:239412 28/126 (22%)
Necessary and sufficient for interaction with ADAM10. /evidence=ECO:0000250|UniProtKB:Q8NG11 114..232 27/124 (22%)

Return to query results.
Submit another query.