DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan5a

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_068078345.1 Gene:tspan5a / 450026 ZFINID:ZDB-GENE-041010-145 Length:301 Species:Danio rerio


Alignment Length:261 Identity:57/261 - (21%)
Similarity:105/261 - (40%) Gaps:45/261 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFF-----LISAAENAVSIGKNVAGGLIIALGVVILIIAIFG 67
            :|:.:...|.:|.:||:|.:..|::.     ::|...:...:|......|.:.:|.|:.|:...|
Zfish    29 IKYFIFGFNIIFWLLGVAFLGIGLWAWSEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAG 93

  Fly    68 CLAAIHEAPVRL---LIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINEGFDRLWESERNQTGA 129
            |:.|:.|....|   .:::|.:..|.|...|...:.....||.::..||... |.:..:.:....
Zfish    94 CIGALRENTFLLKFFSVFLGIIFFLELTAGILAFVFKDWIKDQLNFFINNNI-RAYRDDIDLQNL 157

  Fly   130 LSYYESWLQCCGVNSSEDYWIIH--------------HGIPSSCCPESKCMDT------------ 168
            :.:.:.:.:|||...::| |.::              .|:|.|||.:....|.            
Zfish   158 IDFTQEYWECCGAFGADD-WNLNIYFNCTDSNPSREKCGVPFSCCTKDPAEDVINTQCGYDVRAK 221

  Fly   169 PSRVFKT-----GCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSSVKNQSRRNNAVW 228
            |....||     ||...|.|:|.|.|.|...:    .||.|:..:||..|..::.:......|.|
Zfish   222 PDAEQKTYIHVKGCVPQFEKWLQDNLTVVAGI----FIGIALLQIFGICLAQNLVSDIEAVRASW 282

  Fly   229 M 229
            :
Zfish   283 V 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 54/244 (22%)
tspan5aXP_068078345.1 Tetraspanin 29..272 CDD:459767 55/248 (22%)
TM4SF9_like_LEL 127..247 CDD:239412 25/121 (21%)

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