DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan13b

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001005970.1 Gene:tspan13b / 449797 ZFINID:ZDB-GENE-041010-45 Length:203 Species:Danio rerio


Alignment Length:245 Identity:58/245 - (23%)
Similarity:97/245 - (39%) Gaps:65/245 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GATTVKHVLLLLNFVF---SVLGLALIAFG-IFFLISAAENAVSIGKNVAGGLIIALGVVILIIA 64
            |.|..|:.|..||.::   |:|.:.:.|:| .|.|:|:.:        |.|| ||.:||.:..:|
Zfish     5 GFTCSKNSLCALNILYVMVSLLMIGIAAWGKCFGLVSSFQ--------VVGG-IIGIGVFLFFVA 60

  Fly    65 IFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINE---------GFDRLW 120
            :.|.:.|:....|.|..|   :::|.|..::...:||      ...:|||         |::...
Zfish    61 LAGLIGAMKHHQVLLFFY---MIILFLVFVVQFAVSS------ACLAINEKQQNHLLEVGWNNSL 116

  Fly   121 ESERNQTGALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPE----SKCMDTPSRVFKTGCKAAF 181
            .::|:       .|..|.|||.:        |..:..||...    |.|         |.|.|..
Zfish   117 TTQRD-------VEKSLNCCGFS--------HMDVNGSCAAPCFHYSTC---------TTCAAKI 157

  Fly   182 VKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSSVKNQS--RRNNAVWM 229
            .::..:.|.....:.......|.:|.   ||.| ..:||.  |.|.:.::
Zfish   158 QEHAGEVLRFVGGIGLFFSFTEILGV---WLTY-RYRNQKDPRANPSAFL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 51/222 (23%)
tspan13bNP_001005970.1 Tetraspanin 9..189 CDD:459767 52/225 (23%)

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