DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan7

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001124290.1 Gene:tspan7 / 449539 ZFINID:ZDB-GENE-040927-5 Length:249 Species:Danio rerio


Alignment Length:233 Identity:57/233 - (24%)
Similarity:111/233 - (47%) Gaps:33/233 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TTVKHVLLLLNFVFSVLGLALIAFGIF-------FLISAAENAVSIGKNVAGGLIIALGVVILII 63
            |.:|.:|::.:|||.:.|..|:|.|::       ::...|||:.:     |..::|..|..|::.
Zfish    13 TCLKTLLIVYSFVFWITGAILLAVGLWGKFILGPYISLIAENSTN-----APYVLIGTGTTIIVF 72

  Fly    64 AIFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSI----NEGFDRLWESER 124
            .:|||.|....:|..|.:|...:.|:.||:|: .|:|....:..|.|:.    ||.... :.::.
Zfish    73 GLFGCFATCRGSPWMLKLYAMFLSLVFLAELV-AGISGFVFRHEIKGTFLRTYNEAVQN-YNAQD 135

  Fly   125 NQTGALSYYESWLQCCGVNS-----SEDYWIIHHGIPSSCCPE-SKCMDT--------PSRVFKT 175
            .::.|:...:..|:||||.:     |..|:.: :|||.|||.. |.|..:        |::|::.
Zfish   136 ERSIAVDNVQRSLRCCGVLNYTSWFSSVYFPV-NGIPPSCCANISDCNASDLRNATIAPTKVYQQ 199

  Fly   176 GCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLL 213
            ||......:::..:.:...|.:.:...:.:|.:....|
Zfish   200 GCYELVTTFIETNMGIIAGVTFGIAFSQLIGMLLACCL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 56/231 (24%)
tspan7NP_001124290.1 Tetraspanin 15..239 CDD:459767 56/231 (24%)
TM4SF2_6_like_LEL 110..213 CDD:239414 24/104 (23%)

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