DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp42Ei and Tsp96F

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001262976.1 Gene:Tsp96F / 43127 FlyBaseID:FBgn0027865 Length:284 Species:Drosophila melanogaster


Alignment Length:270 Identity:57/270 - (21%)
Similarity:115/270 - (42%) Gaps:56/270 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLG--ATTVKHVLLLLNFVFSVLGLALIAFGIF------FLISAAENAVSIGKNVAGGLIIALG 57
            |||.  .:.||::::|:|.:|.::||.::...::      |::|..:|....  ::|..:.:|:|
  Fly     1 MGLNGCCSCVKYLMVLINILFWLIGLTIVVTSVWMLTDPTFMLSMTQNYNHY--HIALYVFLAIG 63

  Fly    58 VVILIIAIFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKD--------GISGSINE 114
            ::|.:.|.|||.....|:.. ||:....|:|:::...|..|..:...||        .:..|:.|
  Fly    64 ILITLGAFFGCCGVCRESQC-LLVSFFCVILIVMVAQIAAGAWAFHNKDKLDDIVRAAVKSSVQE 127

  Fly   115 GFDRLWESERNQTGALSYYESWLQCCGVNSSEDYWI---------------------IHHGIPSS 158
            .:.:...|.|..|  ....:..|:|||.:...| |.                     :.:.||.|
  Fly   128 EYGQSTMSSRTVT--FDTLQKNLKCCGADGPGD-WATSRFNNVDRTNIVEIAVSSMNVFYNIPES 189

  Fly   159 CC----PESKC-------MDTP--SRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFG 210
            ||    .:::|       ...|  :.:::.||....::.:.:..:....|...:::.|.:...|.
  Fly   190 CCKDNLKDNECELSRRLKFGGPLNNAIYQQGCVDKLIEIIYENWVTIFAVTAAVILLELLSLTFA 254

  Fly   211 WLLYSSVKNQ 220
            ..|..:|:||
  Fly   255 LSLCCAVRNQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 50/253 (20%)
Tsp96FNP_001262976.1 Tetraspanin 10..259 CDD:459767 51/254 (20%)
CD151_like_LEL 107..233 CDD:239408 22/128 (17%)

Return to query results.
Submit another query.