DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and cd81

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:238 Identity:47/238 - (19%)
Similarity:96/238 - (40%) Gaps:26/238 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGATT--VKHVLLLLNFVFSVLGLALIAFGIF---------FLISAAENAVSIGKNVAG-GLI 53
            ||:...|  :|::|.:.||:|.:.|..::...::         .|....|:..:.|....| .:|
 Frog     1 MGVEGCTKCIKYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLLFQQFEDKHAPGTFYIGVYII 65

  Fly    54 IALGVVILIIAIFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINEGFDR 118
            ||:|.|::.:...||..||.|:...|..:...:|:|...: :..|:.....:|.:|..:...:..
 Frog    66 IAVGAVMMFVGFLGCYGAIQESQCLLGTFFACLVILFACE-VAAGIWGFVNRDQVSKEMRLFYSE 129

  Fly   119 LW--------ESERNQTGALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKT 175
            ::        |.::.....|..:...|||||..|.:.|  :...|...|...|..::   ::...
 Frog   130 VYQHATTGTKEQQQKALPVLKAFHETLQCCGDASLKKY--VTMSITDMCPKRSNILE---QITIE 189

  Fly   176 GCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSSVK 218
            .|..........||.:..|...::.:...:..:|..:|...::
 Frog   190 DCHQKIDVLFSTKLYLVGIAAVVVAVIMIIEMIFSMVLCCGIR 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 43/223 (19%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 44/224 (20%)

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