DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan13

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_989184.1 Gene:tspan13 / 394792 XenbaseID:XB-GENE-1011146 Length:201 Species:Xenopus tropicalis


Alignment Length:233 Identity:57/233 - (24%)
Similarity:101/233 - (43%) Gaps:43/233 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GATTVKHVLLLLNFVFSVLGLALI---AFGIFFLISAAENAVSIGKNVAGGLIIALGVVILIIAI 65
            |.|..|:.|.:||.::.::.|.||   |:||.|.:.::...|        |:.:|:|:::.:||:
 Frog     5 GFTCSKNSLCVLNLLYIMVSLLLIGVAAWGIGFGLISSLRVV--------GVAVAVGILLFLIAL 61

  Fly    66 FGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSIN-EGFDRLWESERNQT-G 128
            .|.:.||....|.|..|   :::|.|..::...:|.      .|.::| :..|:|.|...|.| |
 Frog    62 VGLIGAIKHHQVLLFFY---MIILFLVFVVQFSVSC------ASLALNKDQQDQLLEVGWNHTNG 117

  Fly   129 ALSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKTGCKAAFVKYLDDKLLVFK 193
            |.:..|..|.|||..|    :..:....::|.|:...           |......:..:.|.|..
 Frog   118 AHTDIERSLNCCGFRS----YSKNDTCGATCAPDCHT-----------CAPIIESHAAEVLRVVG 167

  Fly   194 IVCWLLVIGEAVGAVFGWLLYSSVKNQS--RRNNAVWM 229
            .:.:.....|.:|.   ||.| ..:||.  |.|.:.::
 Frog   168 GIGFFFSFTEILGV---WLTY-RYRNQKDPRANPSAFL 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 50/210 (24%)
tspan13NP_989184.1 Tetraspanin 9..187 CDD:459767 51/213 (24%)

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