DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan34b

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_956702.2 Gene:tspan34b / 393380 ZFINID:ZDB-GENE-040426-1362 Length:243 Species:Danio rerio


Alignment Length:265 Identity:63/265 - (23%)
Similarity:108/265 - (40%) Gaps:79/265 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIF----------FLISAAENAVSIGK--NVAGGLIIALGVVI 60
            :|.::.|.|.:..:.|..::..||:          |:.|....:..:|:  || |.|:||||.|:
Zfish     7 LKTMMFLFNGIIFLAGGVILGVGIWVKVDNGSILNFMQSLPGASSQMGQVLNV-GYLLIALGAVL 70

  Fly    61 LIIAIFGCLAAIHEAPVRLLIY------------VGAVVLLI---LAQLIF--LGM-------SS 101
            :::...||..||.|:...|:::            .||:|:|.   ||:.:.  ||:       |.
Zfish    71 VVLGFLGCCGAIKESRCMLMLFFIIILIIFIAEVAGAIVILAFRPLAETLIKQLGVDAVKSLQSD 135

  Fly   102 HGTKDGISGSINEGFDRLWESERNQTGALSYYESWLQCCG------------VNSSEDYWIIHHG 154
            .|....::|        ||.:  ..||        ::|||            |||:::|      
Zfish   136 FGKNPDVTG--------LWNT--TMTG--------MKCCGFNNYTDFTNSFFVNSTKNY------ 176

  Fly   155 IPSSCCPESKCMDTP---SRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSS 216
             |..||..|.|....   |.|  |||..|.:|.:|...::...|...:...|....:...:||..
Zfish   177 -PVQCCNTSPCNQAAVMNSTV--TGCFPALIKLVDKNAVIIIAVALGIAALELAAMIVSMVLYCK 238

  Fly   217 VKNQS 221
            :.:::
Zfish   239 IGSKA 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 61/256 (24%)
tspan34bNP_956702.2 Tetraspanin 7..237 CDD:459767 62/257 (24%)
tetraspanin_LEL <139..211 CDD:351888 25/98 (26%)

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