DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tspan2a

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001018160.1 Gene:tspan2a / 378854 ZFINID:ZDB-GENE-050522-511 Length:211 Species:Danio rerio


Alignment Length:224 Identity:58/224 - (25%)
Similarity:95/224 - (42%) Gaps:40/224 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFF--------LISAAENAVSIGKNVAGGLIIALGVVILIIA 64
            ||::|.:.||:|.:.|..::|.|::.        |:|  ||.......:|..::|..|.:::|:.
Zfish    11 VKYLLFVFNFIFWLSGSLVLAVGLWLRFDPDTTSLLS--ENDAPENFFIAVYILIGAGGIMMIVG 73

  Fly    65 IFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINEGFDRLWESERNQTGA 129
            .|||..|:.|:.. ||....|.:|||....:..|:.....||.|...:...::...:.| |.|..
Zfish    74 FFGCFGAVRESQC-LLGSFFACLLLIFGAEVAAGVFGFLNKDQIIKEVQNYYESATKME-NGTVI 136

  Fly   130 LSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKTGCKAAFVKYLDDKLLVFKI 194
            .|.:.|.|.|||..||          |...|.|.          ...|..|...:.::||.:...
Zfish   137 TSAFHSVLDCCGTESS----------PIETCTEG----------NKDCVQAIEDFFNEKLFIIGY 181

  Fly   195 VCWLLVIGEA----VGAVFGWLLYSSVKN 219
            |    .||.|    :|.:|..:|..:::|
Zfish   182 V----GIGIAGVMVIGMIFSMVLCCAIRN 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 56/217 (26%)
tspan2aNP_001018160.1 Tetraspanin 11..202 CDD:459767 57/218 (26%)

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