DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Tsp42En

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_523640.1 Gene:Tsp42En / 35624 FlyBaseID:FBgn0033135 Length:218 Species:Drosophila melanogaster


Alignment Length:220 Identity:65/220 - (29%)
Similarity:112/220 - (50%) Gaps:16/220 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNVAGGLIIALGVVILIIAIFGCLAAI 72
            :|.||::||.:.|::|:.|||..::.|.|:.....   :::|..:.|.:|..:::.:..||.|. 
  Fly     8 LKAVLIVLNVLLSLIGVTLIALSVYELNSSTPGTF---EHIAIVVQIFVGTFVVLTSFLGCFAT- 68

  Fly    73 HEAPVRL-LIYVGAVVLLILAQL-IFLGMSSHGTKDGISGSINEGFDRLWESERNQTGALSYYES 135
              |.|.| |::...:.||||..| |::..::|.| |.:..| .:.|...|..:|.....:|..|.
  Fly    69 --ARVSLGLVWSYVICLLILLCLQIYIIAAAHST-DYVERS-KKDFLATWADQRTNVERISLLEQ 129

  Fly   136 WLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKTGCKAAFVKYLDDKLLVFKIVCWLLV 200
            ...|||...:.||.::..|||.||..:.:..:  ..:|..||..|...:..|.:.:..|:.|||:
  Fly   130 KYSCCGQLGAHDYILMGRGIPLSCYKDQERRE--YSLFSGGCLQAVQAHATDNVAIGLIIKWLLL 192

  Fly   201 IGE--AVGAVFGWLLYSSVKNQSRR 223
            :.|  |:||...  |..:|:|:.||
  Fly   193 LVEFAALGAATH--LGITVRNKLRR 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 60/209 (29%)
Tsp42EnNP_523640.1 Tetraspanin 8..>135 CDD:459767 38/134 (28%)
tetraspanin_LEL 96..180 CDD:239401 23/87 (26%)

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