DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and cd82a

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_997826.3 Gene:cd82a / 324098 ZFINID:ZDB-GENE-030131-2818 Length:256 Species:Danio rerio


Alignment Length:262 Identity:65/262 - (24%)
Similarity:109/262 - (41%) Gaps:56/262 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGA-TTVKHVLLLLNFVFSVLGLALIAFGIFFLIS-----AAENAVSIGKNVAGGLIIALGVV 59
            ||.|. |..|:.|.|.||:|.:.|..::.||::.|:.     |.....|:...|...::|.:|..
Zfish     1 MGKGCITATKYFLFLFNFIFFIFGATIMGFGLWILLDNQSLIAVLQESSVILKVVSYILIGVGSF 65

  Fly    60 ILIIAIFGCLAAIHEAPVRLLIYVGAVVLLILAQ-----LIFLGMSSHGTK-DGISGSI------ 112
            .:::...|||.||:|....|.:|...::|::|||     ||:.......|: |.|...:      
Zfish    66 SMLLGFLGCLGAIYEIRCLLGLYFTCLLLILLAQVAVSILIYFQRDLLKTEADKIVSQVVANYPG 130

  Fly   113 -NEGFDRLWESERNQTGALSYYESWLQCCGVNSSEDYWIIHHGI--------PSSC--------- 159
             |:..::.|:          |.:..:||||.|...| |..:|.|        |.||         
Zfish   131 QNKTAEQAWD----------YLQRTMQCCGWNGRMD-WDENHIIKNNTVPLYPCSCHNYSIQAPI 184

  Fly   160 ------CPESKCMDTPSRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLLYSSVK 218
                  | ::...|.|  :::|||......:|.....:...:|..:.:.|.:|.:|...|..||.
Zfish   185 VPDNGFC-QASSSDWP--IYQTGCLEHVGSWLFTNYGIILGICLGVAVIELLGMIFSMGLCKSVH 246

  Fly   219 NQ 220
            .:
Zfish   247 QE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 58/246 (24%)
cd82aNP_997826.3 None

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