DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Tspan9

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_001101360.1 Gene:Tspan9 / 312728 RGDID:1304740 Length:330 Species:Rattus norvegicus


Alignment Length:234 Identity:59/234 - (25%)
Similarity:111/234 - (47%) Gaps:18/234 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAV---SIGKNVAGGLIIALGVVILIIAIFGCL 69
            :|:::.|.|.:|.:.|..|:..||:..:|....|.   |.....|..|:||:|.::::....|||
  Rat   100 LKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCL 164

  Fly    70 AAIHEAPVRLLIYVGAVVLLILAQLI-----FLGMSSHGTKDGISGSINEGFDRLWESERN--QT 127
            .||.|....||.:...:::::||:||     |:.|..  ..:.....:.||. .|:.:|.|  ..
  Rat   165 GAIKENKCLLLSFFIVLLIILLAELILLILFFVYMDK--VNENAKQDLKEGL-LLYNTENNVGLK 226

  Fly   128 GALSYYESWLQCCGVNSSEDYWII--HHGIPSSCCPESK--C-MDTPSRVFKTGCKAAFVKYLDD 187
            .|.:..::.::||||....|::.:  .:.:|..||.|:.  | .::.:.::||||......:.||
  Rat   227 NAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCCMENSQGCGRNSTTPLWKTGCYEKVKLWFDD 291

  Fly   188 KLLVFKIVCWLLVIGEAVGAVFGWLLYSSVKNQSRRNNA 226
            ...|...|....:|.:.:|..|...|:..:....::.:|
  Rat   292 NKHVLGTVGMCFLIMQILGMAFSMTLFQHIHRTGKKYDA 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 57/220 (26%)
Tspan9NP_001101360.1 Tetraspanin 100..319 CDD:459767 58/221 (26%)
NET-5_like_LEL 196..293 CDD:239418 24/99 (24%)

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