DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Tsp3A

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_525054.2 Gene:Tsp3A / 31244 FlyBaseID:FBgn0040334 Length:304 Species:Drosophila melanogaster


Alignment Length:291 Identity:53/291 - (18%)
Similarity:102/291 - (35%) Gaps:99/291 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLIS---------AAENAVSIGKNVAGGLIIALGVVILII 63
            ||:::.||||||.:.|..|:..|::....         ..||...:..|::..:|:| |.||.::
  Fly    43 VKYMIFLLNFVFWLFGGLLLGIGVYAFRDKWEDANGSVRLENFYDVFLNISLVMILA-GTVIFLV 106

  Fly    64 AIFGCLAAIHEAPVRLLIYVGAVVLLILAQLI-------------------FLGMSSHGTKDGIS 109
            :..||:.|:.|....|..|...::|..|.::.                   |.....|..:|   
  Fly   107 SFSGCVGALRENTFLLKFYSMCLLLFFLLEMAIAIVCFVCPQYMNTFLEKQFTHKIIHSYRD--- 168

  Fly   110 GSINEGFDRLWESERNQTGALSYYESWLQCCGVNSS-------EDYW------IIHHGIPSSCC- 160
                         :.:....:.:.:...:|||:::|       .:|:      :...|:|.||| 
  Fly   169 -------------DPDLQNFIDFAQQEFKCCGLSNSGYQDWSKNEYFNCSSPSVEKCGVPYSCCI 220

  Fly   161 -----------------------PESKCMDTPSRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIG 202
                                   ||:..:     ::.:||......:.:..|.|        :.|
  Fly   221 NATDISSGLVNIMCGYGVQNAPVPEATKL-----IWTSGCIEIVRVWAEHNLYV--------IAG 272

  Fly   203 EAVGAVFGWLLY----SSVKNQSRRNNAVWM 229
            .|:|.....||.    .:::.|.....:.|:
  Fly   273 NALGIALIQLLVIYLAKTLEGQIELQKSRWL 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 50/270 (19%)
Tsp3ANP_525054.2 Tetraspanin 43..>187 CDD:459767 31/160 (19%)
penumbra_like_LEL 144..267 CDD:239411 17/143 (12%)

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