Protein Alignment Tsp42Ei and Upk1b

DIOPT Version :10

• Sequence 1: NP_523635.2
• Gene: Tsp42Ei / 35618
• FlyBaseID: FBgn0033130
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: NP_001019424.1
• Gene: Upk1b / 303924
• RGDID: 1307806
• Length: 260
• Species: Rattus norvegicus
• Alignment Length: 267
• Identity: 49/267 - (18%)
• Similarity: 83/267 - (31%)
• Gaps: 91/267 - (34%)

  Fly    11 VLLLLNFVFSVLGLALIAFGIFF---------LISAAENAVSIGKNVAGGLIIALGVVILIIAIF 66
            :|:..:.:..:.|:||.|..|||         |:.|..|....|   |..:.:.:|:.:..:::.
  Rat    14 LLIFGHVIVGMCGIALTAECIFFVSDQHSLYPLLEATNNDDIFG---AAWIGMFVGICLFCLSVL 75

  Fly    67 GCLAAIHEAPVRLLIY-----------VGAVVL-----------LILAQLIF-LGMSSHGTKDG- 107
            ..:..:......||.|           |.:.:.           |.|.|::. ...:|..|.|.
  Rat    76 AIVGIMKSNRKILLAYFIMMFIVYGFEVASCITAATQRDFFTTNLFLKQMLMRYQNNSPPTNDDK 140

  Fly   108 -ISGSINEGFDRLWESERNQTGALSYYESWLQCCGVNSSEDY-----------------WIIHHG 154
             .:..:.:.:|||...:              .|||||...|:                 |
  Rat   141 WKNSYVTKTWDRLMLQD--------------HCCGVNGPSDWQKYTSAFRVENSDADYPW----- 186

  Fly   155 IPSSCCPESKCMD----------TPSRVFKTGCKAAFVKYLDDKL-----LVFKIVCWLLVIGEA 204
             |..||...|..:          .|......||.......:|...     ..|.|:||...:  .
  Rat   187 -PRQCCVMDKLQEPLNLDACKLGVPGYYHSQGCYELISGPMDRHAWGVAWFGFAILCWTFWV--L 248

  Fly   205 VGAVFGW 211
            :|.:|.|
  Rat   249 LGTMFYW 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ei	NP_523635.2	Tetraspanin	8..214	CDD:459767	49/267 (18%)
Upk1b	NP_001019424.1	Tetraspanin	14..>161	CDD:459767	28/163 (17%)
		uroplakin_I_like_LEL	120..230	CDD:239409	24/129 (19%)