Protein Alignment Tsp42Ei and Tspan1

DIOPT Version :10

• Sequence 1: NP_523635.2
• Gene: Tsp42Ei / 35618
• FlyBaseID: FBgn0033130
• Length: 229
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 250
• Identity: 50/250 - (20%)
• Similarity: 97/250 - (38%)
• Gaps: 54/250 - (21%)

  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGK---------NVAGGLIIALGVVILII 63
            :|.:::|.|.:..:.|.||:|.||:..:.......:.|.         || |..:||.|.|:.|:
  Rat     7 IKVMMILFNLLIFLCGAALLAVGIWVSVDGTSFLKAFGSLSSSAMQFVNV-GYFLIAAGAVLFIL 70

  Fly    64 AIFGCLAAIHEAPVRLLIYVGAVVLLILAQ-------LIFLGMSSHGTKDGISGSINEG------ 115
            ...||..|..|....|:::...::::.:|:       |::..|:.......:..:|.:.
  Rat    71 GFLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALVYTTMAEQFLTFLVVPAIEKDYGYQTE 135

  Fly   116 FDRLWESERNQTGALSYYESWLQCCGVNSSEDY----WIIHHGI-PSSCCPES-------KCMDT 168
            |.::|.|..          ..|.|||.|:..|:    ::..:.: |..||..:       .|.:.
  Rat   136 FTQVWNSTM----------EGLHCCGFNNYTDFNSSRFVKENKVFPPFCCANNTDSHTVEPCTED 190

  Fly   169 PSRVFKT-GCKAAFVKYLDDKLLVFKIVCWLLVIG----EAVGAVFGWLLYSSVK 218
            .::.... ||    .|.:..|:....:....:.:|    |....|....||.::|
  Rat   191 KAKSMNVQGC----FKQILQKIRTNAVTVGGVAVGVAALELAAMVVSMYLYCNLK 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp42Ei	NP_523635.2	Tetraspanin	8..214	CDD:459767	47/244 (19%)
Tspan1	NP_001004236.1	Tetraspanin	7..>151	CDD:459767	32/154 (21%)
		uroplakin_I_like_LEL	106..211	CDD:239409	20/118 (17%)