DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Cd63

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_063119178.1 Gene:Cd63 / 29186 RGDID:62080 Length:304 Species:Rattus norvegicus


Alignment Length:227 Identity:52/227 - (22%)
Similarity:95/227 - (41%) Gaps:38/227 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GATTVKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNVAGGL----IIALGVVILIIA 64
            |...||.:|.:|...|....:.|||.|:...: ..:.|:: .:..||.|    |||:|..:.::|
  Rat    30 GMKCVKFLLYVLLLAFCACAVGLIAIGVAVQV-VLKQAIT-HETTAGSLLPVVIIAVGAFLFLVA 92

  Fly    65 IFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINEGFDRLWES--ERNQT 127
            ..||..|..|....::.:...:.|::|.: :.:.::.:..:|.:....::.|.:..::  ..|:|
  Rat    93 FVGCCGACKENYCLMITFAIFLSLIMLVE-VAVAIAGYVFRDQVKSEFSKSFQKQMQNYLTDNKT 156

  Fly   128 GA-LSYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMD---------TPSRVFKTGCKAAFV 182
            .. |...:...:|||.::..| |....|:.....|:|.|::         ..|.:...||     
  Rat   157 ATILDKLQKENKCCGASNYTD-WERIPGMAKDRVPDSCCINITVGCGNDFKESTIHTQGC----- 215

  Fly   183 KYLDDKLLVFKIVCW-----LLVIGEAVGAVF 209
                    |..|..|     |||.|.|:|..|
  Rat   216 --------VETIAAWLRKNVLLVAGAALGIAF 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 51/223 (23%)
Cd63XP_063119178.1 None

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