DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Cd37

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_017444339.1 Gene:Cd37 / 29185 RGDID:62035 Length:396 Species:Rattus norvegicus


Alignment Length:262 Identity:58/262 - (22%)
Similarity:101/262 - (38%) Gaps:66/262 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENAVSIGKNVA-----GGLIIALGVVILIIAIFG 67
            :|:.|.:.|..|.|||..:..||.:.||........:|.:..     ..::...||:.:.:|:.|
  Rat    34 IKYFLFVFNLFFFVLGGLIFCFGTWILIDKTSFVSFVGLSFVPLQTWSKVLSVSGVLTMALALLG 98

  Fly    68 CLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINEGFDRLWESERNQTGALSY 132
            |:.|:.|....|.:|.| ::||:.|..|.||:.....:..:...:.|...|..:|.|......:.
  Rat    99 CVGALKELRCLLGLYFG-MLLLLFATQITLGILISTQRVRLERRVQELVLRTIQSYRTNPDETAA 162

  Fly   133 YESW------LQCCG--------------VNSSEDYWIIHHGIPSSCC----------------- 160
            .|||      |:|||              .|.||:.:     :|.||.                 
  Rat   163 EESWDYAQFQLRCCGWQSPRDWNKAQMLKANGSEELF-----VPCSCYNSTATNDSSGFDKLFLS 222

  Fly   161 ------PESKCMDT------PSR--VFKTGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGW 211
                  |.:|...|      |::  :::.||..:..|:|.:.::....:|    :|..:..|.|.
  Rat   223 QLSRLGPRAKLRQTADICALPAKAHIYREGCARSLQKWLHNNIISIVGIC----LGVGLLEVSGM 283

  Fly   212 LL 213
            .|
  Rat   284 AL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 58/262 (22%)
Cd37XP_017444339.1 Tetraspanin 49..>177 CDD:459767 31/128 (24%)
CD37_CD82_like_LEL 131..266 CDD:239413 25/139 (18%)

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