DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and tsp-2

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_498803.1 Gene:tsp-2 / 259752 WormBaseID:WBGene00006628 Length:234 Species:Caenorhabditis elegans


Alignment Length:273 Identity:51/273 - (18%)
Similarity:93/273 - (34%) Gaps:115/273 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LALIAFGIFFLISAAENAVSIGKNVAGGLI----------------------------IALGVVI 60
            :|.|:....|.:|.|....|||.::.|.|:                            :...:..
 Worm     5 IAFISRITIFCLSLAMLFCSIGLDIWGSLMEDKSYERDLKDVVFNYNSSQPLADDKFDMRSWIYS 69

  Fly    61 LIIAIFG-CLAAIHEAPVRLLIYVGAV-----------VLLILAQLIFLGMSSHGTKDGISGSIN 113
            :..:|:| |:.|   .|:.::..:||:           ||:::..::.||           ||| 
 Worm    70 VYWSIYGLCIIA---GPLSIIGLIGAISQKKPVLATCLVLIVIFFIMELG-----------GSI- 119

  Fly   114 EGFDRLWESERNQTGALSY-----------------YESWLQCCGVNSSEDYWIIHHGIPSSCCP 161
                .|| |:|....:|.|                 .::...||||...:  |            
 Worm   120 ----ALW-SKRGSLRSLLYRFANDIYLTNSVFDISIIQNTYNCCGVQDGQ--W------------ 165

  Fly   162 ESKCMDTPSRVFKTGCKAAFVKYLDDKLLVFKIV------CWLLVIGEAVGAVFGWLLYSSVKN- 219
              ||.:.||      |..|....:|:.:::..|:      ..:::||.||     .:|....:| 
 Worm   166 --KCPNAPS------CDIALFNSVDNTMMISGIILIPVLLLQIVIIGAAV-----LVLVFEPRNV 217

  Fly   220 ----QSRRNNAVW 228
                :::..|..|
 Worm   218 LRKIEAQHENPAW 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 47/252 (19%)
tsp-2NP_498803.1 Tetraspanin <84..203 CDD:459767 28/157 (18%)

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