DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Cd81

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:XP_063138178.1 Gene:Cd81 / 25621 RGDID:2315 Length:248 Species:Rattus norvegicus


Alignment Length:230 Identity:49/230 - (21%)
Similarity:102/230 - (44%) Gaps:30/230 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLGATT--VKHVLLLLNFVFSVLGLALIAFGIFFLISAAENA---VSIGKNVAGG-------LI 53
            ||:...|  :|::|.:.||||.:.|..::...::........:   :.:|...|..       ::
  Rat     1 MGVEGCTKCIKYLLFVFNFVFWLAGGVILGVALWLRHDPQTTSLLYLELGDKPAPSTFYVGIYIL 65

  Fly    54 IALGVVILIIAIFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISGSINEGFDR 118
            ||:|.|::.:...||..||.|:...|..:...:|:|...: :..|:.....||.|:..:.:.:|:
  Rat    66 IAVGAVMMFVGFLGCYGAIQESQCLLGTFFTCLVILFACE-VAAGIWGFVNKDQIAKDVKQFYDQ 129

  Fly   119 -----LWESERNQTGAL--SYYESWLQCCGVNSSEDYWIIHHGIPSSCCPESKCMDTPSRVFKTG 176
                 :.:.:.|...|:  :::|: |.|||.|:...  :....:.:|.||.|.  ::.:::.|..
  Rat   130 ALQQAVMDDDANNAKAVVKTFHET-LNCCGSNTLTT--LTTTVLRNSLCPSSS--NSFTQLLKED 189

  Fly   177 CKAAFVKYLDDKLLVFKIVCWLLVI-----GEAVG 206
            |.....:....||.:..|...::.:     |..||
  Rat   190 CHQKIDELFSGKLYLIGIAAIVVAVIMVSTGPLVG 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 46/221 (21%)
Cd81XP_063138178.1 None

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