DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp42Ei and Tspan7

DIOPT Version :10

Sequence 1:NP_523635.2 Gene:Tsp42Ei / 35618 FlyBaseID:FBgn0033130 Length:229 Species:Drosophila melanogaster
Sequence 2:NP_062608.2 Gene:Tspan7 / 21912 MGIID:1298407 Length:249 Species:Mus musculus


Alignment Length:240 Identity:63/240 - (26%)
Similarity:110/240 - (45%) Gaps:55/240 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TTVKHVLLLLNFVFSVLGLALIAFGIF-------FLISAAENAVSIGKNVAGGLIIALGVVILII 63
            |.:|.:|::.:|||.:.|:.|:|.|::       ::...|||:.:     |..::|..|..|::.
Mouse    13 TCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTYISLIAENSTN-----APYVLIGTGTTIVVF 72

  Fly    64 AIFGCLAAIHEAPVRLLIYVGAVVLLILAQLIFLGMSSHGTKDGISG-----SINEGFDRLW-ES 122
            .:|||.|....:|..|.:|...:.|:.||:|:          .||||     .|.:.|.|.: ::
Mouse    73 GLFGCFATCRGSPWMLKLYAMFLSLVFLAELV----------AGISGFVFRHEIKDTFLRTYTDA 127

  Fly   123 ERNQTG------ALSYYESWLQCCGV----NSSEDYWIIHHGIPSSCC-PESKC--MD------T 168
            .:|..|      |:.:.:..|.||||    |.|...:.:.||||.||| .|:.|  :|      .
Mouse   128 MQNYNGNDERSRAVDHVQRSLSCCGVQNYTNWSSSPYFLDHGIPPSCCMNETDCNPLDLHNLTVA 192

  Fly   169 PSRVFKTGCKAAFVKYLDDKLLVFKIVCWLLVIGEAVGAVFGWLL 213
            .::|.:.||......:::..:.:        :.|.|.|..|..|:
Mouse   193 ATKVNQKGCYDLVTSFMETNMGI--------IAGVAFGIAFSQLI 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp42EiNP_523635.2 Tetraspanin 8..214 CDD:459767 62/238 (26%)
Tspan7NP_062608.2 Tetraspanin 15..239 CDD:459767 62/238 (26%)
TM4SF2_6_like_LEL 110..213 CDD:239414 26/102 (25%)

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